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Transposable elements : a guide to the perplexed and the novice, with appendices on RNAi, chromatin remodeling and gene tagging.
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ISBN: 1402014589 Year: 2003 Publisher: Deventer Kluwer

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Abstract

Keywords

Transposons


Article
Developmental genome reorganization in ciliated protozoa : the transposon link

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Abstract

Keywords

GENOME --- PROTOZOA --- TRANSPOSONS


Book
Transposable elements
Authors: ---
ISBN: 354059342X 3642797970 3642797954 Year: 1996 Volume: 204 Publisher: Berlin ; Heidelberg ; New York Springer

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Book
Plasmids and transposons : environmental effects and maintenance mechanisms
Authors: ---
ISBN: 0126755507 1322280460 1483272516 Year: 1980 Publisher: New York (N.Y.) : Academic press,

Lateral DNA transfer: mechanisms and consequences
Author:
ISBN: 0879696036 0879696214 9780879696030 Year: 2001 Publisher: Cold Spring Harbor (N.Y.): Cold Spring Harbor Laboratory,

Transposition : forty-third symposium of the Society for general microbiology held at Warwick, April 1988
Authors: --- --- ---
ISBN: 0521354641 Year: 1988 Volume: vol 43 Publisher: Cambridge London New York Cambridge University Press


Book
Transposons and the dynamic genome
Authors: ---
ISBN: 3642242529 3642020046 9786612655074 1282655078 3642020054 Year: 2009 Publisher: Dordrecht ; New York : Springer,

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Abstract

There are only few major key functions that lie beneath the fundamental architecture of metabolism and life. These are multiplication, variation and heredity. Only if these factors interact synergistically can Darwinian selection power the evolution of biodiversity. Transposable elements have always played a major role in this process. The genomes of all organisms consist of chromosomes that are built up of double-stranded nucleic acid chains on whose stability and integrity the existence of cells depend. While DNA repair warrants the chemical integrity of DNA and protects it from metabolic and environmental mutagens, meiotic recombination and transposable element activity appear to counteract the molecular guardians of genome stability. Transposable elements and their kind often make up the bulk of genomic DNA, often approaching 50% of the genome. By contrast, the classic genes represent as little as 1.8% of genomic DNA, in case of the human genome. This volume gives an overview on mobile DNA and how such contradiction to the obligatory stability of genomes can be understood. Obviously, an understanding can only be achieved by cutting deeply into the evolutionary history of life along with the evolution of transposable elements and dynamic genomes. This book therefore also celebrates Charles Darwin’s 200th birthday. The reader is challenged to view the role of movable DNA along historical roots from the levels of cells to populations to biological species integrating the accompanying molecular evolution of host, cell and genome interaction. One will witness even the reactivation of a long since dead, fossil transposable element and the infection of germline cells by the first established, mobile and endogenous insect retrovirus.

Advanced bacterial genetics : use of transposons and phage for genomic engineering
Authors: ---
ISBN: 9780123737496 0123737494 9786611003647 1281003646 0080475108 Year: 2007 Volume: 421 Publisher: Amsterdam ; Lomdon : Elsevier,

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The critically acclaimed laboratory standard for more than fifty years, Methods in Enzymology is one of the most highly respected publications in the field of biochemistry. Since 1955, each volume has been eagerly awaited, frequently consulted, and praised by researchers and reviewers alike. Now with over 400 volumes (all of them still in print), the series contains much material still relevant today-truly an essential publication for researchers in all fields of life sciences. This new volume presents methods related to the use of bacterial genetics for genomic engineering. The book in


Book
Plant transposable elements : impact on genome structure and function
Authors: ---
ISSN: 16102096 ISBN: 3642437591 364231841X 3642318428 1299197590 Year: 2012 Volume: 24 Publisher: Berlin ; New York : Springer,

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Transposable elements are DNA sequences with the capacity to move within a genome. Although their presence and impact has long been known, the recent genome-wide analysis of many eukaryotic genomes has uncovered their major role in genome dynamics and function. The present book explains how to recognize and study transposable elements, e.g. by using state-of-the-art strategies based on new-generation sequencing. Moreover, the impact of transposable elements on plant genome structure and function is reviewed in detail and illustrated in examples and case studies. The book is intended both for readers familiar with the field and for newcomers. With large-scale sequencing becoming increasingly available, more and more people will come across transposable element sequences in their data, and this volume will hopefully help to convince them that transposable elements are not just "junk" DNA, and may actually be the most interesting and fun part of their data!

Keywords

Genetic regulation -- Congresses. --- Insertion elements, DNA -- Congresses. --- Mutagens -- Congresses. --- Plant molecular genetics -- Congresses. --- Insertion elements, DNA --- Mutagens --- Plant genetic regulation --- Transposons --- Plant molecular genetics --- Interspersed Repetitive Sequences --- Genome --- DNA --- Genetic Structures --- Repetitive Sequences, Nucleic Acid --- Genome Components --- Nucleic Acids --- Nucleic Acids, Nucleotides, and Nucleosides --- Genetic Phenomena --- Base Sequence --- Chemicals and Drugs --- Phenomena and Processes --- Molecular Structure --- Biochemical Phenomena --- Chemical Phenomena --- DNA Transposable Elements --- Genome, Plant --- Biology --- Health & Biological Sciences --- Genetics --- Transposons. --- Plant molecular genetics. --- Tn elements --- Transposable elements --- Life sciences. --- Nucleic acids. --- Plant biochemistry. --- Cell biology. --- Plant genetics. --- Life Sciences. --- Plant Genetics & Genomics. --- Plant Biochemistry. --- Nucleic Acid Chemistry. --- Cell Biology. --- Molecular genetics --- Plant genetics --- Plant molecular biology --- Mobile genetic elements --- Biochemistry. --- Cytology. --- Plant Genetics and Genomics. --- Biological chemistry --- Chemical composition of organisms --- Organisms --- Physiological chemistry --- Chemistry --- Medical sciences --- Plants --- Cell biology --- Cellular biology --- Cells --- Cytologists --- Polynucleotides --- Biomolecules --- Composition --- Phytochemistry --- Plant biochemistry --- Plant chemistry --- Biochemistry --- Botany --- Phytochemicals --- Plant biochemical genetics


Book
Genetics of Biodegradation and Bioremediation
Authors: ---
Year: 2020 Publisher: Basel, Switzerland MDPI - Multidisciplinary Digital Publishing Institute

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Many biodegradation pathways, both aerobic and anaerobic, have already been characterised, and the phylogenetic relationships among catabolic genes within them have been studied. However, new biodegradation activities and their coding genes are continuously being reported, including those involved in the catabolism of emerging contaminants and those generally regarded as non-biodegradable. Gene regulation is also an important issue for the efficient biodegradation of contaminants. Specific induction by the substrate and over-imposed global regulatory networks adjust the expression of the biodegradation genes to meet bacterial physiological needs. New biodegradation pathways can be assembled in a particular strain or in a bacterial consortium by recruiting biodegradation genes from different origins through horizontal gene transfer. The abundance and diversity of biodegradation genes, analysed by either genomic or metagenomic approaches, constitute valuable indicators of the biodegradation potential of a particular environmental niche. This knowledge paves the way to systems metabolic engineering approaches to valorise biowaste for the production of value-added products.

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