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"This fully revised Fourth Edition to a best-selling resource provides the reader with a hands-on guide to computational biology, primarily in the area of sequence analysis. The subject matter will cover a broad spectrum of concepts in bioinformatics, beginning with an overview of biological databases and ending with a series of chapters on predictive and comparative algorithms. Using relevant biological examples, the book will provide background on and strategies for using many of the most powerful and commonly-used algorithms for sequence-based discovery. Given the explosion in the number of organisms whose genomes have been sequenced over the last several years, the emergence of new types of data sets (particularly those derived using next-generation sequencing technologies), and increasing emphasis on being able to make effective use of "big data", the book is both timely and important to investigators in molecular biology and related fields. With a full-color, enlarged page design, this edition offers the most readable, up-to-date, and thorough introduction to the field for biologists. The new "Foundations" section insures that readers have a firm understanding of the technologies that generate the data, as well as the essential statistical and programming tools. Features include special boxes, enhanced use of real examples, and problem sets with answers provided on the book's dedicated website (www.wiley.com/bioinformatics). A glossary and appendix of sample file formats rounds out the book's reader-friendly, 'hands-on' treatment"--
Computational Biology --- Sequence Analysis --- Base Sequence --- Databases, Nucleic Acid --- Databases, Protein --- methods --- Base Sequence. --- Databases, Nucleic Acid. --- Databases, Protein. --- Methods. --- methods. --- Bioinformatics --- Protein Structure Databases --- SwissProt --- Amino Acid Sequence Databases --- Databases, Amino Acid Sequence --- Protein Databases --- Protein Sequence Databases --- SWISS-PROT --- Database, Protein --- Database, Protein Sequence --- Database, Protein Structure --- Databases, Protein Sequence --- Databases, Protein Structure --- Protein Database --- Protein Sequence Database --- Protein Structure Database --- SWISS PROT --- Sequence Database, Protein --- Sequence Databases, Protein --- Structure Database, Protein --- Structure Databases, Protein --- DNA Databanks --- DNA Sequence Databases --- European Molecular Biology Laboratory Nucleotide Sequence Database --- Nucleic Acid Sequence Databases --- RNA Sequence Databases --- DDBJ --- DNA Data Bank of Japan --- DNA Data Banks --- DNA Databases --- Databases, DNA --- Databases, DNA Sequence --- Databases, Nucleic Acid Sequence --- Databases, RNA --- Databases, RNA Sequence --- EMBL Nucleotide Sequence Database --- GenBank --- Nucleic Acid Databases --- RNA Databases --- Bank, DNA Data --- Banks, DNA Data --- DNA Data Bank --- DNA Databank --- DNA Database --- DNA Sequence Database --- Data Bank, DNA --- Data Banks, DNA --- Databank, DNA --- Databanks, DNA --- Database, DNA --- Database, DNA Sequence --- Database, Nucleic Acid --- Database, RNA --- Database, RNA Sequence --- Nucleic Acid Database --- RNA Database --- RNA Sequence Database --- Sequence Database, DNA --- Sequence Database, RNA --- Sequence Databases, DNA --- Sequence Databases, RNA --- Genetic Testing --- Gene Library --- DNA Fingerprinting --- DNA Sequences --- DNA Sequence --- Nucleotide Sequence --- RNA Sequence --- Base Sequences --- Nucleotide Sequences --- RNA Sequences --- Sequence, Base --- Sequence, DNA --- Sequence, Nucleotide --- Sequence, RNA --- Sequences, Base --- Sequences, DNA --- Sequences, Nucleotide --- Sequences, RNA --- Genes --- Nucleotides --- Bio-informatics --- Biological informatics --- Biology --- Information science --- Computational biology --- Systems biology --- Data processing
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From basic performing of sequence alignment through a proficiency at understanding how most industry-standard alignment algorithms achieve their results, Multiple Sequence Alignment Methods describes numerous algorithms and their nuances in chapters written by the experts who developed these algorithms. The various multiple sequence alignment algorithms presented in this handbook give a flavor of the broad range of choices available for multiple sequence alignment generation, and their diversity is a clear reflection of the complexity of the multiple sequence alignment problem and the amount of information that can be obtained from multiple sequence alignments. Each of these chapters not only describes the algorithm it covers but also presents instructions and tips on using their implementation, as is fitting with its inclusion in the highly successful Methods in Molecular Biology series. Authoritative and practical, Multiple Sequence Alignment Methods provides a readily available resource which will allow practitioners to experiment with different algorithms and find the particular algorithm that is of most use in their application.
Sequence alignment (Bioinformatics) --- Computational biology --- Publication Formats --- Genetic Techniques --- Biology --- Databases, Genetic --- Investigative Techniques --- Databases, Factual --- Biological Science Disciplines --- Publication Characteristics --- Analytical, Diagnostic and Therapeutic Techniques and Equipment --- Databases as Topic --- Natural Science Disciplines --- Information Systems --- Disciplines and Occupations --- Information Storage and Retrieval --- Medical Informatics Applications --- Information Science --- Medical Informatics --- Sequence Alignment --- Databases, Protein --- Methods --- Computational Biology --- Handbooks --- Health & Biological Sciences --- Biology - General --- Computational biology. --- methods --- Methodological Studies --- Methodological Study --- Procedures --- Studies, Methodological --- Study, Methodological --- Method --- Procedure --- Protein Structure Databases --- SwissProt --- Amino Acid Sequence Databases --- Databases, Amino Acid Sequence --- Protein Databases --- Protein Sequence Databases --- SWISS-PROT --- Database, Protein --- Database, Protein Sequence --- Database, Protein Structure --- Databases, Protein Sequence --- Databases, Protein Structure --- Protein Database --- Protein Sequence Database --- Protein Structure Database --- SWISS PROT --- Sequence Database, Protein --- Sequence Databases, Protein --- Structure Database, Protein --- Structure Databases, Protein --- Determination, Sequence Homology --- Sequence Homology Determination --- Alignment, Sequence --- Alignments, Sequence --- Determinations, Sequence Homology --- Sequence Alignments --- Sequence Homology Determinations --- Computer Science, Medical --- Health Information Technology --- Informatics, Clinical --- Informatics, Medical --- Information Science, Medical --- Clinical Informatics --- Medical Computer Science --- Medical Information Science --- Health Information Technologies --- Information Technologies, Health --- Information Technology, Health --- Medical Computer Sciences --- Medical Information Sciences --- Science, Medical Computer --- Technologies, Health Information --- Technology, Health Information --- Information Sciences --- Science, Information --- Sciences, Information --- Application, Medical Informatics --- Applications, Medical Informatics --- Informatics Applications, Medical --- Informatics Application, Medical --- Medical Informatics Application --- Data Files --- Data Linkage --- Data Retrieval --- Data Sources --- Data Storage --- Data Storage and Retrieval --- Information Extraction --- Information Storage --- Machine-Readable Data Files --- Information Retrieval --- Data File --- Data File, Machine-Readable --- Data Files, Machine-Readable --- Data Source --- Extraction, Information --- Files, Machine-Readable Data --- Information Extractions --- Machine Readable Data Files --- Machine-Readable Data File --- Retrieval, Data --- Storage, Data --- Ancillary Information Systems --- Data Systems --- Emergency Care Information Systems --- Information Retrieval Systems --- Ancillary Information System --- Data System --- Information Retrieval System --- Information System --- Information System, Ancillary --- Information Systems, Ancillary --- System, Ancillary Information --- System, Data --- System, Information --- System, Information Retrieval --- Systems, Ancillary Information --- Systems, Data --- Systems, Information --- Systems, Information Retrieval --- Natural Sciences --- Physical Sciences --- Discipline, Natural Science --- Disciplines, Natural Science --- Natural Science --- Natural Science Discipline --- Physical Science --- Science, Natural --- Science, Physical --- Sciences, Natural --- Sciences, Physical --- Data Banks as Topic --- Data Bases as Topic --- Databanks as Topic --- Biologic Sciences --- Biological Science --- Science, Biological --- Sciences, Biological --- Biological Sciences --- Life Sciences --- Biologic Science --- Biological Science Discipline --- Discipline, Biological Science --- Disciplines, Biological Science --- Life Science --- Science Discipline, Biological --- Science Disciplines, Biological --- Science, Biologic --- Science, Life --- Sciences, Biologic --- Sciences, Life --- Data Banks, Factual --- Data Bases, Factual --- Databanks, Factual --- Data Bank, Factual --- Data Base, Factual --- Databank, Factual --- Database, Factual --- Factual Data Bank --- Factual Data Banks --- Factual Data Base --- Factual Data Bases --- Factual Databank --- Factual Databanks --- Factual Database --- Factual Databases --- Investigative Technics --- Investigative Technic --- Investigative Technique --- Technic, Investigative --- Technics, Investigative --- Technique, Investigative --- Techniques, Investigative --- Genetic Data Banks --- Genetic Data Bases --- Genetic Databanks --- Genetic Information Databases --- Genetic Databases --- Genetic Sequence Databases --- OMIM --- Online Mendelian Inheritance In Man --- Bank, Genetic Data --- Banks, Genetic Data --- Data Bank, Genetic --- Data Banks, Genetic --- Data Base, Genetic --- Data Bases, Genetic --- Databank, Genetic --- Databanks, Genetic --- Database, Genetic --- Database, Genetic Information --- Database, Genetic Sequence --- Databases, Genetic Information --- Databases, Genetic Sequence --- Genetic Data Bank --- Genetic Data Base --- Genetic Databank --- Genetic Database --- Genetic Information Database --- Genetic Sequence Database --- Information Database, Genetic --- Information Databases, Genetic --- Sequence Database, Genetic --- Sequence Databases, Genetic --- Genetic Technic --- Genetic Technics --- Genetic Technique --- Technic, Genetic --- Technics, Genetic --- Technique, Genetic --- Techniques, Genetic --- Genetics --- Alignment, Sequence (Bioinformatics) --- Determination, Sequence homology (Bioinformatics) --- Homology determination, Sequence (Bioinformatics) --- Sequence homology determination (Bioinformatics) --- Bio-Informatics --- Biology, Computational --- Computational Molecular Biology --- Bioinformatics --- Molecular Biology, Computational --- Bio Informatics --- Bio-Informatic --- Bioinformatic --- Biologies, Computational Molecular --- Biology, Computational Molecular --- Computational Molecular Biologies --- Molecular Biologies, Computational --- Life sciences. --- Bioinformatics. --- Life Sciences. --- Bio-informatics --- Biological informatics --- Information science --- Systems biology --- Biosciences --- Science --- Data processing
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