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Periodical
Prediction of protein structure and the principles of protein conformation.
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ISBN: 0306431319 1461288606 1461315719 9780306431319 Year: 1990 Publisher: Plenum Press

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Abstract

With the applications of prediction gaining momentum in fields such as enzymology and immunology, this volume presents an evaluation of present methods of expounding the various algorithms. These, when utilized on PCs or larger computers, can instantaneously take a primary amino acid sequence and produce a two- or three-dimensional image of the str.


Periodical
Quantitative structure-activity relationships
ISSN: 15213838 09318771 Publisher: Weinheim

Computer simulation of chemical and biomolecular systems
Authors: ---
ISBN: 0897663594 0897663608 9780897663595 9780897663601 Year: 1986 Volume: 482 Publisher: New York New York Academy of Sciences

Computer graphics and molecular modeling
Authors: ---
ISBN: 087969193X 9780879691936 Year: 1986 Publisher: Cold Spring Harbor Cold Spring Harbor laboratory

Protein Structure Prediction : Methods and Protocols
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ISBN: 0896036375 9786610842476 1280842474 1592593682 9780896036376 Year: 2000 Publisher: Totowa, NJ : Humana Press : Imprint: Humana,

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The deeper understanding of protein structure now emerging from cutting-edge research is not only illuminating evolutionary and biochemical mechanisms, but also promises enormous ramifications for molecular medicine, as well as for biotechnology, biophysics, biology, genetics, and other molecular sciences. In Protein Structure Prediction: Methods and Protocols, world-class investigators detail their most successful methods-and the theory behind them-for delineating the shape, form, and function of proteins. The protocols range from basic to advanced and include sequence alignment, the prediction of transmembrane protein structure, and the development of suitable folding potentials. There are also techniques for receptor site prediction, the identification of motifs and domains, the comparative modeling of proteins, the docking of peptides and ligands, and ab initio approaches to protein loop and side-chain prediction. To ensure robust and successful experimental results, each protocol contains step-by-step instructions, as well as tips on pitfalls to avoid and how procedures may be optimized for different systems. Comprehensive, accessible, and highly practical, Protein Structure Prediction: Methods and Protocols offers protein researchers, structural biologists, and other investigators a critical synthesis of the latest research results, as well as the vital guidance needed to understand the structure and interaction of proteins and peptides.

Protein structure prediction
Authors: ---
ISBN: 1597455741 1588297527 9781588297525 Year: 2008 Publisher: Totowa, NJ Humana Press

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This book covers elements of both the data-driven comparative modeling approach to structure prediction and also recent attempts to simulate folding using explicit or simplified models. Despite the unsolved mystery of how a protein folds, advances are being made in predicting the interactions of proteins with other molecules, such as small ligands, nucleic acids or other proteins. Also rapidly advancing are the methods for solving the inverse folding problem, the problem of finding a sequence to fit a structure. This book focuses on the various computational methods for prediction, their successes and their limitations, from the perspective of their most well known practitioners.

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