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This book focuses on technologies used to study horizontal gene transfer (HGT) in prokaryotes. Beginning with a section on the detection and isolation of mobile genetic elements (MGEs), the volume continues with sections concentrating on the analysis of conjugation, transformation, and transduction in HGT as well as a series of methods to analyze the adaptation and evolution of MGEs, with special attention paid to bioinformatics tools. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Horizontal Gene Transfer: Methods and Protocols serves as an ideal guide to the further study of this pervasive, all-important mechanism of genetic originality.
Microbial genetics. --- Microbial genomics. --- Bacteriology. --- Microbial Genetics and Genomics. --- Microbiology --- Microorganisms --- Genetics --- Genomics --- Microbial genetics
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Die Industrielle Mikrobiologie gewinnt sowohl in der Lebensmittel- und Pharmaindustrie als auch in der chemischen Industrie zunehmend an Bedeutung. Sie vereint das Fachwissen von Naturwissenschaftlern und Ingenieuren über die Nutzung von Bakterien und Pilzen. Diese Mikroorganismen sind in der Lage, effizient nachwachsende Rohstoffe zu verwerten und in nachhaltige Produkte umzuwandeln. So konnten in der letzten Zeit mit Hilfe der Gentechnik mikrobielle Produktionsstämme gezielt entwickelt werden, die bestimmte Metabolite oder Pharmaproteine in großen Mengen produzieren. Als innovative Querschnittsdisziplin bietet die Industrielle Mikrobiologie also wichtige Voraussetzungen für die Entwicklung konkurrenzfähiger Produkte auf der Basis umweltschonender Verfahren. In dieser Branche besteht außerdem ein zunehmender Bedarf an gut ausgebildeten Fachkräften. Dieses neue Lehrbuch wurde von erfahrenen Wissenschaftlern aus Hochschulen und der Industrie verfasst. Es soll Studierende aus Life Science-Bachelorstudiengängen sowie fortgeschrittene Studierende der Chemie oder der Ingenieurwissenschaften in die Industrielle Mikrobiologie einführen. Es vermittelt die Grundlagen der Entwicklung von Produktionsstämmen und erklärt spezielle Verfahren zur Herstellung mikrobieller Produkte. Dabei wird aufgezeigt, wie das Potential der Mikroorganismen optimal genutzt werden kann. Zunächst wird ein Überblick über die geschichtliche Entwicklung der Industrielle Mikrobiologie und eine Einführung in die Bioverfahrenstechnik gegeben. Anschließend werden in 10 Kapiteln ausgewählte mikrobielle Verfahren zur Herstellung von Lebensmitteln, organischen Säuren, Alkoholen, Aminosäuren, Vitaminen, Antibiotika, Pharmaproteinen, Enzymen, Biopolymeren sowie Steroiden und Aromastoffen beschrieben. Im letzten Kapitel wird am Beispiel der biologischen Abwasserreinigung aufgezeigt, dass die Mikroorganismen nicht nur ein enormes Synthese-, sondern auch ein großes Abbaupotential besitzen, mit dem sie einen Beitrag zu den Stoffwechselkreisläufen auf unserer Erde leisten. Die Autoren wünschen sich, dass dieses Lehrbuch das Interesse vieler Studierender an diesem spannenden Lehr- und Forschungsgebiet weckt und sie daraus Nutzen ziehen können, um dann selbst zur weiteren Entwicklung der Industriellen Mikrobiologie beizutragen. .
Microbiology. --- Biotechnology. --- Microbial genetics. --- Microbial genomics. --- Applied Microbiology. --- Microbial Genetics and Genomics.
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This book provides definitive methods to perform stable isotope probing (SIP) experiments, covering a wide spectrum of stable isotope techniques used in microbial ecology, such as methods to target and analyze labeled DNA, rRNA, mRNA, protein, and PLFA. Protocols to study stable isotope fractionation by microbial pathways, the analysis of labeled communities with Raman microscopy, Chip-SIM, as well as quantitative SIP (qSIP) and high-resolution SIP (HR-SIP) are also featured. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Stable Isotope Probing: Methods and Protocols provides readers with up-to-date protocols ranging from basic to the most sophisticated applications of SIP and will benefit anyone pursuing this exciting area of study.
Microbiology. --- Microbial genetics. --- Microbial genomics. --- Microbial Genetics and Genomics. --- Genomics --- Microbial genetics --- Microorganisms --- Genetics --- Microbiology --- Microbial biology --- Biology
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This book addresses cutting-edge techniques for researching transposon mutagenesis, an approach for identifying individual gene contributions to the phenotypic characteristics of a particular microorganism. The volume begins with methods for specific microorganisms and include protocols for individual microorganisms ranging from pathogens such as Salmonella to Bifidobacterium, a microorganism considered beneficial to humans and animals. The final section addresses more general protocols including plasmid transfer and bioinformatic tools as well as novel applications of transposon methodologies such as transposon-aided capture of antibiotic resistant plasmids. Written for the highly successful Methods in Molecular Biology series, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Microbial Transposon Mutagenesis: Protocols and Applications serves as a valuable reference for scientists seeking to apply transposon mutagenesis to microbial genetic analyses and functionality.
Microbial genetics. --- Microbial genomics. --- Microbiology. --- Microbial Genetics and Genomics. --- Microbial biology --- Biology --- Microorganisms --- Genomics --- Microbial genetics --- Genetics --- Microbiology
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Lieber EXPERIMENTATOR, wir präsentieren Ihnen hier das Grundlagenwissen sowie Tipps und Tricks für den Umgang mit Nucleinsäuren. Sie werden sofort merken, dass der Autor Lust und Frust der täglichen Laborroutine genau kennt. Aus dem Inhalt: Präparieren, Fällen, Konzentrieren und Reinigen von Nucleinsäuren Das molekularbiologische Handwerkszeug (Restriktionsenzyme, Gele, Blotten) PCR (Polymerase-Kettenreaktion) RNA-Isolierung, -Transkription Klonierung von DNA-Fragmenten DNA-Nachweis und -Analyse (Markierung von Sonden, Hybridisierung, Screening, Sequenzierung) Modifikation und Funktionsanalyse von DNA-Sequenzen (Mutagenese, In-vitro-Translation, transgene Mäuse, Transgenexpression, Gentherapie, Genomik) Lieferantenverzeichnis Protokoll-Sammlungen gibt es viele, aber wer erklärt einem, was sich hinter den Methoden verbirgt? Dieses Buch richtet sich an alle Experimentatoren, die molekularbiologische Versuche durchführen wollen und gern nachvollziehen möchten, was sich in ihrem Reaktionsgefäß abspielt. Das ganze Spektrum der üblichen molekularbiologischen Methoden wird vorgestellt, kommentiert und Alternativen aufgezeigt. Und weil die Laborversuche nicht alles sind, findet sich auch noch ein Kapitel zum Thema Karriereplanung. Der lockere Ton wendet sich gleichermaßen an Studenten wie an BTAs und Laboranten, aber auch der alte Hase wird hier und dort noch etwas Neues entdecken. Die 7. Auflage wurde überarbeitet und aktualisiert. Über den Autor: Dr. Cornel Mülhardt. Geboren 1965. Biologie-Studium in Heidelberg und Hamburg. Wissenschaftlicher Angestellter in Erlangen (Institut für Med. Biochemie). Seit 1998 tätig bei Hoffmann-La Roche (Basel) in der Forschungsrichtung Neurobiologie. Seit Mai 2001 Leiter der Biologielaboranten-Ausbildung. Rezensionen der Vorauflagen: Wer sich einen realistischen Überblick über den Stand der Technik in der Molekularbiologie verschaffen will oder gar selber im Labor molekularbiologisch tätig werden (sein) möchte, muss dieses Buch lesen, chemikalienresistent einschlagen und ständig bei sich tragen! BioTec Zeigt Auswege ausexperimentellen Sackgassen und weckt ein Gespür für das richtige Experiment zur rechten Zeit. Bioworld.
Cell biology. --- Animal genetics. --- Microbial genetics. --- Microbial genomics. --- Proteomics. --- Cell Biology. --- Animal Genetics and Genomics. --- Microbial Genetics and Genomics.
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This book provides a comprehensive and complete overview of biomarkers in clinical practice for inflammatory bowel disease (IBD) bringing together the literature in a clear and concise manner. The book bridges the gap between growing knowledge at the bench and current and future applications of biomarkers in clinical practice. The central structure of the book focuses on prognostic and predictive biomarkers in IBD with an emphasis on the fields of research and scientific techniques (genomics, proteomics and metabonomics) that have led to biomarker discovery and places these biomarkers within a clinical context to help understand their utility in clinical practice. This book will be of use to clinicians who have an interest in using biomarkers in clinical practice as well as clinician researchers and scientists involved in the biomarker research pipeline. The author team comprises experts from around the world in order to bring together the literature in an effort to inform clinicians and researchers about the current state-of-the art in biomarker discovery. It is intended to assist future research efforts and indicate how biomarkers might be best applied to clinical practice both at present and in the future.
Gastroenterology. --- Microbial genetics. --- Microbial genomics. --- Proteomics. --- Microbial Genetics and Genomics. --- Molecular biology --- Proteins --- Genomics --- Microbial genetics --- Microorganisms --- Genetics --- Microbiology --- Internal medicine --- Digestive organs --- Diseases --- Gastroenterology .
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Metagenomics has proven to be a powerful tool for exploring the ecology, metabolic profiling, and comparison of complex microbial communities as well as its important applications in the mining of metagenomes for genes encoding novel biocatalysts and drug molecules for bioindustries. In Metagenomics: Methods and Protocols, expert researches provide an overview and introduction to basic methods commonly used in laboratories that have a strong background in microbial metagenomics. The book attempts to address all of the working steps involved in this crucial field, beginning with DNA isolation from soils and marine samples and continuing with the construction and screening of libraries, along with key advise involving bioinformatic tools available to analyze large metagenomic sequence data sets. Written in the highly successful Methods in Molecular Biology™ series format, chapters include brief introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Metagenomics: Methods and Protocols serves as a very complete guide to available screening protocols for all major biocatalysts in order to allow for the easy setup of these screens in any microbiology lab.
Human genetics. --- Microbiology. --- Microbial genetics. --- Microbial genomics. --- Human Genetics. --- Microbial Genetics and Genomics. --- Genomics --- Microbial genetics --- Microorganisms --- Genetics --- Microbiology --- Microbial biology --- Biology --- Heredity, Human --- Human biology --- Physical anthropology
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Homologous recombination is important in various aspects of DNA metabolism, including damage repair, replication, telomere maintenance, and meiosis, and yeast genetics has successfully provided a framework for the mechanism of homologous recombination. Divided into four convenient sections, DNA Recombination: Methods and Protocols covers recent techniques that best utilize the advantages of the yeast system, prescribing to the belief that yeast will keep serving as a great model organism to study homologous recombination. Chapters have also been included for such exceptions as the group of genes involved in recombination that are found solely in higher eukaryotes, such as BRCA2. And looking forward, a necessary step in the direction of understanding the homologous recombination process is to isolate the machine and let it work in a test tube. Understanding the design by studying the appearance and behavior of the machinery as a single molecule will be an important milestone toward understanding the mechanism of action of the machinery. Techniques covering these topics have also been included. Written in the successful Methods in Molecular Biology™ series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible protocols, and notes on troubleshooting and avoiding known pitfalls. Authoritative and easily accessible, DNA Recombination: Methods and Protocols serves as an ideal guide to scientists of all backgrounds with its well-honed methodologies and strives to bring the reader to the next level of understanding regarding this vital subject.
Human genetics. --- Microbial genetics. --- Microbial genomics. --- Human Genetics. --- Microbial Genetics and Genomics. --- Genomics --- Microbial genetics --- Microorganisms --- Genetics --- Microbiology --- Heredity, Human --- Human biology --- Physical anthropology
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The discovery of wide-spread RNA-based regulation in bacteria has led to new evaluations of the importance of bacterial regulatory RNA in every aspect of bacterial physiology. In Bacteria Regulatory RNA: Methods and Protocols, expert researchers in the field detail many of the methods which are now commonly used to study bacterial regulatory RNA. These include methods and techniques to identify regulatory RNAs, characterizing the function and expression of regulatory RNAs in bacterial cells, RNA structure prediction, and interactions between regulatory RNAs and proteins. Written in the highly successful Methods in Molecular Biology™ series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Bacteria Regulatory RNA: Methods and Protocols seeks to aid scientists in the further study of bacterial regulatory RNA.
Human genetics. --- Microbial genetics. --- Microbial genomics. --- Human Genetics. --- Microbial Genetics and Genomics. --- Genomics --- Microbial genetics --- Microorganisms --- Genetics --- Microbiology --- Heredity, Human --- Human biology --- Physical anthropology
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This volume opens by covering two main types of approaches widely used to determine essential genes: single-gene knockouts and transposon mutagenesis, in both prokaryotes and Candida albicans. Given the significant advancement in the computational predictions of microbial essential genes, the second half of the book examines four main types of approaches: comparative genomics, supervised machine learning, constraint-based methods, and corrections of transposon mutagenesis data, as well as databases and servers that are often used in studying gene essentiality. Written in the highly successful Methods in Molecular Biology series format, chapters include an introduction to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and up-to-date, Gene Essentiality: Methods and Protocols will aid researchers who wish to further our knowledge in this vital field of study.
Human genetics. --- Microbial genetics. --- Microbial genomics. --- Human Genetics. --- Microbial Genetics and Genomics. --- Genomics --- Microbial genetics --- Microorganisms --- Genetics --- Microbiology --- Heredity, Human --- Human biology --- Physical anthropology
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