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Review of previous edition: “I am often asked by physicists, mathematicians and engineers to recommend a book that would be useful to get them started in computational molecular biology. I am also often approached by my colleagues in computational biology to recommend a solid textbook for a graduate course in the area. Tamar Schlick has written the book that I will be recommending to both groups. Tamar has done an amazing job in writing a book that is both suitably accessible for beginners, and suitably rigorous for experts.” J. J. Collins, Boston University, USA. “Molecular modeling … is now an important branch of modern biochemistry. … Schlick has brought her unique interdisciplinary expertise to the subject. … One of the most distinguished characteristics of the book is that it makes the reading really fun … and the material accessible. … a crystal clear logical presentation … . Schlick has added a unique title to the collection of mathematical biology textbooks … . a valuable introduction to the field of computational molecular modeling. It is a unique textbook … .” Hong Qian, SIAM Review, 2005.

Biomolecules -- Models. --- Biomolecules --Models -- Computer simulation. --- Biomolecules --- Chemistry --- Biology --- Health & Biological Sciences --- Physical Sciences & Mathematics --- Physical & Theoretical Chemistry --- Biology - General --- Models --- Computer simulation --- Models. --- Computer simulation. --- Biological molecules --- Mathematics. --- Biochemical engineering. --- Biochemistry. --- Biomathematics. --- Biophysics. --- Biological physics. --- Mathematical and Computational Biology. --- Biophysics and Biological Physics. --- Biochemical Engineering. --- Simulation and Modeling. --- Biochemistry, general. --- Biological physics --- Medical sciences --- Physics --- Mathematics --- Biological chemistry --- Chemical composition of organisms --- Organisms --- Physiological chemistry --- Computer modeling --- Computer models --- Modeling, Computer --- Models, Computer --- Simulation, Computer --- Electromechanical analogies --- Mathematical models --- Simulation methods --- Model-integrated computing --- Bio-process engineering --- Bioprocess engineering --- Biochemistry --- Biotechnology --- Chemical engineering --- Math --- Science --- Composition --- Molecules --- Molecular biology --- Biological and Medical Physics, Biophysics.

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Review of previous edition: I am often asked by physicists, mathematicians and engineers to recommend a book that would be useful to get them started in computational molecular biology. I am also often approached by my colleagues in computational biology to recommend a solid textbook for a graduate course in the area. Tamar Schlick has written the book that I will be recommending to both groups. Tamar has done an amazing job in writing a book that is both suitably accessible for beginners, and suitably rigorous for experts.  J. J. Collins, Boston University, USA. Molecular modeling ¦ is now an important branch of modern biochemistry. ¦ Schlick has brought her unique interdisciplinary expertise to the subject. ¦ One of the most distinguished characteristics of the book is that it makes the reading really fun ¦ and the material accessible. ¦ a crystal clear logical presentation ¦ . Schlick has added a unique title to the collection of mathematical biology textbooks ¦ . a valuable introduction to the field of computational molecular modeling. It is a unique textbook ¦ .  Hong Qian, SIAM Review, 2005.

Mathematics --- Biomathematics. Biometry. Biostatistics --- General biochemistry --- General biophysics --- Biology --- Biochemical engineering --- Computer science --- Artificial intelligence. Robotics. Simulation. Graphics --- biofysica --- biomathematica --- bio-engineering --- vormgeving --- biochemie --- biologie --- informatica --- mineralen (chemie) --- simulaties --- mijnbouw --- wiskunde --- Biomolecules --- 51-7 --- 539.2 --- 539.2 Properties and structure of molecular systems --- Properties and structure of molecular systems --- 51-7 Mathematical studies and methods in other sciences. Scientific mathematics. Actuarial mathematics. Biometrics. Econometrics etc. --- Mathematical studies and methods in other sciences. Scientific mathematics. Actuarial mathematics. Biometrics. Econometrics etc. --- Biological molecules --- Molecules --- Molecular biology --- Models --- Models&delete& --- Computer simulation

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Mathematical physics --- Biomathematics. Biometry. Biostatistics --- Human biochemistry --- Artificial intelligence. Robotics. Simulation. Graphics --- medische biochemie --- biomathematica --- vormgeving --- biochemie --- simulaties --- biometrie --- wiskunde --- fysica

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The focus of this book deals with a cross cutting issue affecting all particle transport algorithms and applications; verification and validation (V&V). In other words, are the equations being solved correctly and are the correct equations being solved? Verification and validation assures a scientist, engineer or mathematician that a simulation code is a mirror of reality and not just an expensive computer game. In this book, we will learn what the astrophysicist, atmospheric scientist, mathematician or nuclear engineer do to assess the accuracy of their code. What convergence studies, what error analysis, what problems do each field use to benchmark and ascertain the accuracy of their transport simulations. Is there a need for new benchmark problems? Are there experiments that can be used to help validate the simulation results? If not, are there new experiments that could address these issues? These are all questions raised in this proceedings of the Second Computational Methods in Transport Workshop.

Astrophysics --- Mathematical physics --- Engineering sciences. Technology --- Computer science --- astrofysica --- analyse (wiskunde) --- informatica --- wiskunde --- informaticaonderzoek --- ingenieurswetenschappen --- fysica --- Radiative transfer --- Transport theory --- 51-74 --- 519.63 --- 681.3 *G18 --- 681.3*I61 --- 681.3*I61 Simulation theory: model classification; continuous simulation; discrete simulation (Simulation and modeling) --- Simulation theory: model classification; continuous simulation; discrete simulation (Simulation and modeling) --- 681.3 *G18 Partial differential equations: difference methods; elliptic equations; finite element methods; hyperbolic equations; method of lines; parabolic equations (Numerical analysis) --- Partial differential equations: difference methods; elliptic equations; finite element methods; hyperbolic equations; method of lines; parabolic equations (Numerical analysis) --- 519.63 Numerical methods for solution of partial differential equations --- Numerical methods for solution of partial differential equations --- Boltzmann transport equation --- Transport phenomena --- Particles (Nuclear physics) --- Radiation --- Statistical mechanics --- Transfer, Radiative --- Geophysics --- Heat --- Mathematical models --- Mathematics in engineering science and technology --- Radiation and absorption

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Astrophysics --- Mathematical physics --- Engineering sciences. Technology --- Computer science --- astrofysica --- analyse (wiskunde) --- informatica --- wiskunde --- informaticaonderzoek --- ingenieurswetenschappen --- fysica