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The current exponential growth of the world population demands a new set of solutions to keep pushing the boundaries of agricultural systems in a finite world so that global food security can be assured while respecting the environmental fundaments which foster the cultivation of crops in the long run. One particular challenge lies in finding alternative ways to protect plant species against pathogenic organisms limiting their growth potential. Priming is a promising approach to improve the ability of plants to fend of pathogens and thus restrict yield reduction due to disease. It implies the premature exposure of plants to universal molecules associated with the presence of a stressor, thereby preparing defense responses for future threats. Still, optimization and overall understanding of the underlying physiological changes that priming induces are critical to achieving broad-spectrum resistance and successful integration of priming in high-performance, sustainable agriculture. We demonstrated that the exogenous application of inulin- and levan-type fructans (5 g∙L-1) to the foliage of Arabidopsis thaliana limits the extent of lesion development after infection with Botrytis cinerea. The improved defense responses when challenged could partially be attributed to the increased efficiency of reactive oxygen species (ROS) signaling and scavenging. The oxidative burst, which is a characteristic of plant immunity, develops faster compared to negative controls since the accumulation of ROS occurs roughly twice as fast when exposed to the flagellin (flg22) immune elicitor. Besides a faster ROS build-up, the burst profile in samples from plants pretreated with fructan compounds exhibit a smaller width, which points to a quicker recovery from the surge in ROS by more competent scavenging systems. In the days following exposure to fructan priming agents, alterations in the activity of antioxidant enzymes occur, which suggests that the transition to the primed state is mediated by ROS signaling as well. More specifically, the suppression of guaiacol peroxidase possibly assists the intentional generation of ROS for signaling purposes after fructan priming. In contrast, catalase is more active and likely exerts a free radical scavenging function to ensure that the fructan-induced redox changes are transient. The enhanced resilience to infection remained absent when priming with flavonoids (100 µM) naturally occurring in plant tissues. Both quercetin and naringenin failed to reduce lesion development after infection with B. cinerea. Moreover, hydrogen peroxide measurements and catalase activity assays showed no signs of ROS signaling directed at boosting the innate immunity of the test plants.
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Pollinators are essential for a major part of flowering plants. By transporting pollen from one flower to the other, reproduction is made possible. Especially insects are important pollinators. We know that insect communities are declining at alarming rates. This decline could have a serious impact on plant reproduction in the future. It is important to understand the interactions between plants and pollinators to the best of our abilities so we can take adequate measures to protect pollinators from further decline. The pollination interaction is often characterised as a network with certain properties that reveal the general patterns structuring plant-pollinator interactions. Most networks are made at pollinator species level. However, there is ample evidence that individuals within the species differ in their foraging behaviour. Also differences between sexes are commonly observed. Networks that only consider insects at species level thus lose valuable information as a result of generalising individuals from the same species. The goal of our study was to evaluate whether there were differences in foraging between sexes and between individuals within the same insect species. We analysed the pollen present on individual insects and identified the plant species they collected pollen from with metabarcoding. Then we made three plant-pollinator networks that differed in pollinator levels, one at species level, one at sex level and one at individual level. We analysed the patterns and properties of these networks and compared them with each other. Our research revealed that individuals of the same insect species indeed differed in foraging behaviour. There were also significant differences in foraging between the sexes of the red-tailed bumblebee (Bombus lapidarius) and the hairy-legged mining bee (Dasypoda hirtipes). When comparing the three networks we also found significant differences in three network properties. The individual based networks were more specialised and more connected. Our results thus confirm that plant-pollinator networks at species level lose important information compared to networks at individual level. We think it is important that more pollination studies take individual pollinator behaviour into account, so we have a more accurate representation of plant pollinator interactions.
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Popularizing summary Climate change poses a threat to food security and it is therefore necessary to study the impacts of future climate scenarios on plants. However, plants do not work alone and interact with communities of soil microorganisms to obtain vital soil nutrients as well as protect against other disease-causing microorganisms. There are many different types of soil microorganisms which can be broadly categorized based on their relationship which the plant. Epiphytes are microorganisms that live on the surface of plant tissues whereas endophytes are microorganisms that live within plant tissues. There are also free-living soil microorganisms that are found in the soil surrounding a plant’s root system. An area of interest for researchers is to see if the effects of climate change can have an impact on the composition of soil microbial communities. To do this, researchers make use of controlled environmental facilities known as ecotrons to simulate past, present, and even proposed future climate conditions. The aim of this study was to see if different climate scenarios could have an effect on the composition of soil microorganism communities associated with three different grass species. The three grass species were taken from ecotrons to compare the effects of recent and current climate conditions to future climate conditions on the soil microorganism communities associated with each plant. The three plant species were categorized based on their capacity to accumulate fructans, a type of carbohydrate associated with plant stress resistance, and the epiphyte, endophyte and free-living soil communities of these grass species were analysed. One plant was a strong fructan accumulator, one was a weak fructan accumulator and one was not capable of accumulating fructans. There are many different types of fructans and they can also be made by some microorganisms. It was also the aim of the researchers to discover the identity of a subset of these microorganisms and to test to see if these microorganisms could show evidence for producing fructans or being capable of consuming a type of fructan known as levan. The results of the experiment found evidence that different climate scenarios can impact the composition of soil microorganisms for some plants. For example, a larger number of fructan consuming endophytes were found to be associated with the strong fructan accumulator under the future climate conditions compared to the current climate conditions. In addition, a number of microorganisms were identified and most were found to show evidence for fructan production and consumption. However, whether there is a higher occurrence of these types of microorganisms under one climate scenario over another and under one grass species over another remains to be answered. It is hoped that future experiments will increase our understanding of the changes that can occur in the soil communities of plants as a result of climate change and that this knowledge will help inform future agricultural and land use decisions.
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Humans and animals locate and navigate themselves by linking their position to their surroundings. Spatial navigation is a cognitive function in the brain, that makes it possible to do this. By studying the role of navigation, many brain areas have been described to contribute to this. Recent research described the role of the retrosplenial cortex (RSC) in navigation. The RSC is a cortical brain area, that can be subdivided into a granular and dysgranular region. In rodents, the RSC is located more dorsally in the brain resulting in interconnections with many other brain regions. The RSC receives information from brain areas, including the hippocampus, thalamic nuclei, anterior cingulate area and both visual- and motor cortex. Because of these connections, the RSC is involved in spatial navigation. It is suggested that there is a functional difference between the anterior and posterior RSC. Recent research in the Bonin Lab confirms this difference, by indicating that the neurons of the anterior RSC are more linked to spatially modulated areas. While neurons of the posterior RSC are more linked to visual representations. In this project, we hypothesize that there is a difference between long-range input pathways to the anterior and posterior RSC. We performed an optimized retrograde dual labeling approach to label and quantify individual input neurons. In this way, we were able to get a full brain registration and we could observe which areas provide input to the RSC. Our findings confirmed our hypothesis, showing the anterior RSC received more spatial input, while the posterior RSC received more visual input.
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Protocadherins are transmembrane molecules related to the cadherins and are most prominently expressed in the central nervous system. Similar to the cadherins, protocadherins mediate processes such as cell-adhesion and cell-communication activating intracellular pathways necessary for brain development. PCDH10 and PCDH19 (delta2-protocadherins) are clinically relevant proteins to investigate considering that their deficiency results in autism spectrum disorder and epilepsy, respectively. The pathophysiology of these cognitive disorders is complex, however both PCDH10 and PCDH19 abnormalities seem to alter the E/I balance in the brain. In addition, cell populations that co-express Pcdh10 and Pcdh19 can interact and mix. This made it interesting to study their expression patterns and compare their biological functions. In this thesis, we elucidate the expression patterns of Pcdh10 and Pcdh19 in the brain initiated by western blot quantifications of PCDH10 and PCDH19 protein at E13.5, E15.5, E17.5 and P7, followed by their detection in the ganglionic eminences. To understand Pcdh10 in the light of telencephalonic patterning we did a co-expression analysis with markers such as Nkx2-1, Lhx9 and Couptf-2 and found co-localization in defining regions of the developing brain. Furthermore, using a Pcdh19 KO model, we were able to visualize the mosaic patterning of Pcdh19-positive and Pcdh19-negative cells, suggested to underly clustered epilepsy. Lastly, we attempted to optimize a staining protocol for a new Pcdh10HAV5 model but did not succeed. However, further improvements are possible that could visualize PCDH10 protein using immuno-histochemistry techniques. This model will remain essential for understanding PCDH10 functions in the future. Taken together, we elucidated the expression patterns of Pcdh19 and Pcdh10 further in the developing mouse brain, thereby providing insights in the pathophysiology of ASD and/or epilepsy.
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The desert locust, Schistocerca gregaria, is a pest insect with the capability to form large swarms and devastate food production. This year, large swarms have erupted in East Africa and the Middle East, and further threaten Northern India and Pakistan. Now more than ever there is a need to better understand the physiological and molecular processes that control the life cycle and development of S. gregaria. Reproduction is an important element behind the formation of large swarms. Prior research has focused primarily on the reproductive function of female locusts, but the role of male locusts may be bigger than previously thought. Studies in other insects have shown that seminal fluid factors produced in the accessory glands of males are passed to females during mating and cause post mating effects in the females. These post mating effects can greatly impact the reproductive success of these insects. This thesis investigates one such possible factor, short neuropeptide F (sNPF). Previous data have shown the presence of sNPF in the accessory glands of sexually mature males, but not in those of sexually immature males. The intent of this project was to investigate any potential roles that sNPF may play in the development of these accessory glands or on reproductive behavior. To test this hypothesis, we used RNA interference to knock down the expression of the receptor and precursor of sNPF in male locusts. We then observed the locust’s development, mating behavior, and accessory glands. We did not notice any abnormal phenotypes in our experimental animals. We also did not observe any disruptions to mating behavior. The weights of the accessory glands from experimental animals did not differ significantly from the weights of the accessory glands of the control animals. This evidence suggests that sNPF does not impact accessory gland development. However, there is room for future experiments to confirm if sNPF is transferred to the female and to investigate any potential role it has there. To facilitate these future experiments, we successfully collected spermatophore samples from S. gregaria.
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Pesticide applications to protect crop production are an ever growing anthropogenic disturbance that can strongly affect the structure and the functioning of ecosystems. Aquatic environments are vulnerable to pesticide exposure, since these pollutants can leach into the natural ecosystems. The non-target species Daphnia magna plays a key role in aquatic environments and its response to pesticide exposure can affect the stability of a community. Therefore it is important to understand the effects of such exposure on life-history traits of this model organism. With this study, we aimed to (1) assess the effects of pre-exposure and a subsequent shift in pesticide application on population density, main life-history traits and grazing efficiency; (2) to investigate clonal variation in sensitivity to pesticide exposure, as well as assess possible cross-tolerance between different pesticides. Commonly known and ecologically relevant pesticides used in this research are: chlorpyrifos, chlorantraniliprole, deltamethrin and malathion. All measured endpoints varied over time, but this variation was affected by pre-exposure to chlorpyrifos and/ or posterior exposure to a new pesticide. Pre-exposure affected the average adult body size, while secondary exposure affected brood size and somatic growth rate. Population density seemed to be affected by both the pre-exposure and the switch in pesticide application. Additionally, grazing efficiency was affected by the presence of pesticides, which could lead to an effect on the top-down control of D. magna on phytoplankton. Furthermore, clonal variation in sensitivity to pesticides was observed for all pesticides, although less decisively for chlorantraniliprole and deltamethrin. No strong evidence for cross-tolerance was observed, although this could have been expected when two pesticides share a similar mode of action. Overall, we can conclude that pesticide contamination can strongly affect life-history traits of non-target species. Additionally, pesticide exposure can affect grazing efficiency of D. magna and clonal diversity of a population is important to determine its response to pesticide exposure. Therefore, it is important to continuously monitor pesticide regulation and consider proactive approaches to circumvent destabilization of ecosystems.
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The Sonian Forest is an old forest complex in the Region of Brussels and is one of the few Western European forests where the natural dominance of European beech (Fagus sylvatica L.) is preserved. Like many other tree species, F. sylvatica is reliant on fungal symbionts for growth and survival. Ectomycorrhizal (EcM) fungi colonize root tips and ameliorate the host’s nutrient and water acquisition in exchange for carbohydrates. These fungi can extend their mycelia and interlink host trees to establish an underground highway for nutrient exchange, which is labeled a common mycorrhizal network (CMN). For seedlings to not succumb from deficient photosynthates in the dark understory of beech-dominated forests while awaiting canopy opening, they can tap into a CMN allowing mature trees to shunt nutrients to the seedlings. Although natural regeneration was problematic for many decades in the Sonian Forest, it has recently rebounded. Therefore, our aim was to scrutinize the role of EcM fungi in the natural regeneration of F. sylvatica in the Sonian Forest. We collected soil cores and roots from seedlings, saplings, and pole wood from five locations within the forest, and applied next generation sequencing techniques to get an exhaustive overview of EcM fungal community compositions. EcM fungal communities were dominated by Russula, Cenococcum, Lactarius, Laccaria, Amanita, Inocybe, Xerocomellus, and Scleroderma lineages. We found a discrepancy in soil and root sampled EcM fungal communities. Our results suggest that Xerocomellus, Laccaria, Lactarius, Scleroderma, Melanogaster, and Tomentella EcM fungal lineages are frequently associated with regenerating beeches, while Russula, Inocybe, and Amanita are indicative for mature beeches. However, EcM fungal communities were spatially autocorrelated, which is presumably related to functionally redundant taxa and recent management in old growth set aside areas. Within the Zwaenepoel reserve, we found shifts in EcM fungal community composition as beeches age. Russula cf. puellaris, Clavulina cf. cristata, Cenococcum cf. geophilum, Lactarius cf. subdulcis, and Melanogaster cf. intermedius were indicative for regenerating beeches, whereas Cortinarius cf. lignicola, Amanita cf. rubescens, Russula cf. violeipes, Russula cf. velutipes, Meliniomyces, Elaphomyces cf. Leucosporus, and Genea cf. hispidula were related to older beeches. We found a decreasing diversity and increasing evenness of EcM fungal communities as beeches age, which suggests that either the host differentially allocates carbon to better performing EcM fungal taxa, or direct competition among EcM fungal taxa is structuring EcM fungal communities, or both. EcM fungal communities from the reserve were affected by soil moisture content, pH, and soil ammonium content. No distinction in soil EcM fungal communities was found between plots with frequent and without beech regeneration. Altogether, our findings suggest that favorable EcM fungal communities are not the key to successful regeneration. Rather, it is a combination of the accessibility to suitable EcM fungi with a favorable forest microclimate and small-scale increments in light availability that determines successful regeneration of beech.
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In this thesis, the parasite communities of three riverine fish species (three-spined stickleback, topmouth gudgeon and stone loach), that were sampled at 15 locations in the Dijle-Demer basin, were examined and compared. A total of 694 fish were screened and 16 different parasite species were distinguished. The native three-spined stickleback and stone loach were significantly more parasitized than the invasive topmouth gudgeon. No parasites from the native range of topmouth gudgeon have been found in this study. The sampling locations also significantly influenced differences in parasite community composition within and between fish species. Due to differences in diet, behaviour and lifestyle between these fish species, the effects of host related factors, environmental factors and distance between sampling locations were examined to explain these differences in parasite communities. Significant effects of length, species and sex on parasite prevalence, abundance and community composition have been observed. The effects of multiple biotic and abiotic factors on parasite community composition were tested, but no environmental parameters turned out to significantly affect the parasite communities in this research. Sampling locations that were close to each other turned out to have a significantly more similar parasite community composition in threespined stickleback.
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