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Book
Linear Selection Indices in Modern Plant Breeding
Authors: ---
ISBN: 3319912232 3319912224 Year: 2018 Publisher: Cham Springer Nature

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This open access book focuses on the linear selection index (LSI) theory and its statistical properties. It addresses the single-stage LSI theory by assuming that economic weights are fixed and known - or fixed, but unknown - to predict the net genetic merit in the phenotypic, marker and genomic context. Further, it shows how to combine the LSI theory with the independent culling method to develop the multistage selection index theory. The final two chapters present simulation results and SAS and R codes, respectively, to estimate the parameters and make selections using some of the LSIs described. It is essential reading for plant quantitative geneticists, but is also a valuable resource for animal breeders.


Book
Multivariate Statistical Machine Learning Methods for Genomic Prediction.
Authors: --- ---
ISBN: 3030890104 3030890090 Year: 2022 Publisher: Cham Springer Nature

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This book is open access under a CC BY 4.0 license This open access book brings together the latest genome base prediction models currently being used by statisticians, breeders and data scientists. It provides an accessible way to understand the theory behind each statistical learning tool, the required pre-processing, the basics of model building, how to train statistical learning methods, the basic R scripts needed to implement each statistical learning tool, and the output of each tool. To do so, for each tool the book provides background theory, some elements of the R statistical software for its implementation, the conceptual underpinnings, and at least two illustrative examples with data from real-world genomic selection experiments. Lastly, worked-out examples help readers check their own comprehension. The book will greatly appeal to readers in plant (and animal) breeding, geneticists and statisticians, as it provides in a very accessible way the necessary theory, the appropriate R code, and illustrative examples for a complete understanding of each statistical learning tool. In addition, it weighs the advantages and disadvantages of each tool.


Book
Understanding global trends in the use of wheat diversity and international flows of wheat genetic resources
Authors: --- --- ---
Year: 1996 Publisher: Mexico CIMMYT

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Introduction to Experimental Designs with PROC GLIMMIX of SAS : Applications in Food Science and Agricultural Science
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ISBN: 3031655753 Year: 2024 Publisher: Cham : Springer Nature Switzerland : Imprint: Springer,

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In this book, the subject of design and analysis of experiments has been covered in simple language by giving basic concepts of various designs and essential data analysis steps of designed experiments. It has become clear that among researchers, mainly from the areas of food and agricultural sciences, there is a great need for a reference work on design and analysis of experiments that covers basic concepts, provides examples of varied situations that require the use of the experimental designs and that offers clear steps required for the correct analysis execution. This book covers such needs while also sharing codes in the Statistical Analysis Systems (SAS) for each of the designs covered using Proc Glimmix to perform the analysis. It is hoped that this will allow readers to directly analyze the data from their experiments.


Book
Multivariate Statistical Machine Learning Methods for Genomic Prediction
Authors: --- --- ---
ISBN: 9783030890100 Year: 2022 Publisher: Cham Springer International Publishing :Imprint: Springer

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Book
Introduction to Experimental Designs with PROC GLIMMIX of SAS
Authors: --- --- ---
ISBN: 9783031655753 Year: 2024 Publisher: Cham Springer Nature Switzerland :Imprint: Springer

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Abstract

In this book, the subject of design and analysis of experiments has been covered in simple language by giving basic concepts of various designs and essential data analysis steps of designed experiments. It has become clear that among researchers, mainly from the areas of food and agricultural sciences, there is a great need for a reference work on design and analysis of experiments that covers basic concepts, provides examples of varied situations that require the use of the experimental designs and that offers clear steps required for the correct analysis execution. This book covers such needs while also sharing codes in the Statistical Analysis Systems (SAS) for each of the designs covered using Proc Glimmix to perform the analysis. It is hoped that this will allow readers to directly analyze the data from their experiments.

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