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Low-abundance proteome discovery : state of the art and protocols
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ISBN: 1299442765 0124045960 0124017347 9780124045965 9780124017344 9781299442764 Year: 2013 Publisher: Amsterdam : Elsevier,

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Abstract

Low-Abundance Proteome Discovery addresses the most critical challenge in biomarker discovery and progress: the identification of low-abundance proteins. The book describes an original strategy developed by the authors that permits the detection of protein species typically found in very low abundance and that may yield valuable clues to future discoveries. Known as combinatorial peptide ligand libraries, these new methodologies are one of the hottest topics related to the study of proteomics and have applications in medical diagnostics, food quality, and plant analysis. The book is


Book
How proteins work
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ISBN: 9780815344469 0815344465 Year: 2012 Publisher: New York (N.Y.): Garland,

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How Proteins Workis a clear, up-to-date and authoritative account of the principles that govern the way proteins work. This book will provide advanced undergraduate students in biochemistry and biophysics in vivo context for the standard protein sequence-structure-function model. The text will also serve as a valuable resource for graduate students and researchers looking for a reference on the fundamentals underlying protein function.

Techniques in Protein Chemistry
Authors: ---
ISSN: 10808914 ISBN: 0127219579 0126820015 0126820007 0127219587 0120587556 0120587564 0120587572 0120587580 0121947106 0121947114 0121947122 0121947130 012473555X 0124735568 0124735576 0124735584 1283608308 9786613920751 9786611466831 1281466832 0080542263 9786611054311 1281054313 008054228X 032314425X 1322054495 1483268225 1322884021 1483259463 1322340463 1483217590 9780080542287 9780124735576 9781281054319 6611054316 9780080542263 9780121947125 9780124735569 9781483217598 9780121947101 9780121947118 9780126820010 9780124735583 Publisher: Academic Press

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TECHNIQUES IN PROTEIN CHEMISTRY VI, an invaluable bench-top reference source for protein chemists, highlights current methods in the following areas: Protein sequencing and amino acid analysis Mass spectral analysis of peptides and proteins Posttranslational processing High-sensitivity protein and peptide separations Protein folding and NMR Analysis of protein interactions Protein design and engineeringTechniques in Protein Chemistry VI, an invaluable bench-top reference source for protein chemists, highlights current m

Mass spectrometry for biotechnology
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ISBN: 0126474710 9780126474718 9780080535845 0080535844 1281029432 9781281029430 0126474702 9780126474701 Year: 1996 Publisher: San Diego, Calif. Academic Press


Book
Principles of protein X-ray crystallography
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ISBN: 354094091X 038794091X 1475723377 1475723350 9780387940915 9783540940913 Year: 1994 Publisher: New York (N.Y.): Springer,

Capillary Electrophoresis of Proteins and Peptides
Authors: --- ---
ISSN: 10643745 ISBN: 1588290174 159259798X 9786610358250 1280358254 9781592597987 9781588290175 Year: 2004 Volume: 276 Publisher: Totowa, NJ Humana Press :Imprint: Humana

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Capillary electrophoresis (CE) is one of the premier methods for the rapid analysis of pharmaceutical proteins and peptides, and thus now even more important with the sequencing of the human genome and the subsequent advent of proteomics. In Capillary Electrophoresis of Proteins and Peptides, leading academic scientists and expert laboratorians working in the pharmaceutical industry describe their best CE techniques in step-by-step detail for easy reproduction. The authors present cutting-edge techniques for both capillary coatings and analytical detection via laser-induced fluorescence, for the development and commercialization of biopharmaceuticals, and for affinity capillary electrophoresis in the evaluation of protein binding, including the use of protein charge ladders. Additional chapters discuss CE and capillary isoelectric focusing, combined with electrospray mass spectrometry detection, for performing proteomic studies. Areas of special interest covered include proteomic applications, as well as applications in the field of protein-ligand binding. The protocols follow the successful Methods in Molecular Biology™ series format, each offering step-by-step laboratory instructions, an introduction outlining the principle behind the technique, lists of equipment and reagents, and tips on troubleshooting and avoiding known pitfalls. Comprehensive and state-of-the-art, Capillary Electrophoresis of Proteins and Peptides will prove essential to both new and experienced investigators carrying out significant protein and peptide studies in biotechnology, drug discovery, and pharmaceutical research and development.

Signal Transduction Protocols
Authors: --- ---
ISBN: 1588292452 1592598161 9786610359899 1280359897 9781592598168 9781588292452 Year: 2004 Volume: 284 Publisher: Totowa, NJ Humana Press :Imprint: Humana

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Carrying on the high standards of the much-acclaimed first edition, highly experienced investigators have extensively updated Signal Transduction Protocols with many of the new approaches that have been transforming the field. Included in this new edition are readily reproducible immunoassays, fluorescence-based assays, high-throughput methods, protein modification assays, lipid second messenger assays, and chromatin immunoprecipitation techniques. Wherever possible, protocols for the assay of general classes of signal transduction components have been identified so they can be adapted to the assay of any member of that class. The protocols follow the successful Methods in Molecular Biology™ series format, each one offering step-by-step laboratory instructions, an introduction outlining the principle behind the technique, lists of the necessary equipment and reagents, and tips on troubleshooting and avoiding known pitfalls. State-of-the-art and eminently practical, Signal Transduction Protocols, 2nd ed. offers novice and experienced researchers alike an indispensable set of standardized, but readily adaptable, approaches for the assay of key signaling molecules-an invaluable tool for all laboratories newly entering the field, expanding the breadth of previous investigations, or seeking to improve an existing approach.


Book
The phylogenetic handbook
Authors: --- ---
ISBN: 9780521730716 9780521877107 0521730716 0521877105 9780511819049 051173851X 1282539515 9786612539510 0511819048 0511719183 0511719639 0511515758 0511718721 0511517033 9780511738517 9781282539518 9780511719189 9780511719639 9780511515750 9780511718724 9780511517037 Year: 2009 Publisher: Cambridge Cambridge University Press

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The Phylogenetic Handbook is a broad, hands on guide to theory and practice of nucleotide and protein phylogenetic analysis. This second edition includes six new chapters, covering topics such as Bayesian inference, tree topology testing and the impact of recombination on phylogenies, as well as a detailed section on molecular adaptation. The book has a stronger focus on hypothesis testing than the previous edition, with more extensive discussions on recombination analysis, detecting molecular adaptation and genealogy-based population genetics. Many chapters include elaborate practical sections, which have been updated to introduce the reader to the most recent versions of sequence analysis and phylogeny software, including BLAST, FastA, Clustal, T-coffee, Muscle, DAMBE, Tree-puzzle, Phylip, MEGA, PAUP*, IQPNNI, CONSEL, ModelTest, Prottest, PAML, HYPHY, MrBayes, BEAST, LAMARC, SplitsTree, and RDP. Many analysis tools are described by their original authors, resulting in clear explanations that constitute an ideal teaching guide for advanced-level undergraduate and graduate students.

Keywords

Evolution. Phylogeny --- Sequence Analysis, DNA --- Sequence Analysis, Protein --- Phylogenèse --- Models, Genetic. --- DNA phylogeny --- Amino Acid Sequence. --- -Proteins --- fylogenetica --- dna analyse --- 575.852 --- 575.852 Biomacromolecules. Molecular evolution --- Biomacromolecules. Molecular evolution --- Branching processes --- Amino Acid Sequences --- Sequence, Amino Acid --- Sequences, Amino Acid --- Protein Structure, Primary --- Primary Protein Structure --- Primary Protein Structures --- Protein Structures, Primary --- Structure, Primary Protein --- Structures, Primary Protein --- Phylogenies --- Models, genetic. --- Sequence analysis, dna --- Sequence analysis, protein --- Phylogenèse --- Phylogeny --- methods --- Computer programs. --- Amino acid sequence --- Cladistic analysis --- DNA --- Proteins --- Models, Genetic --- aminozuur --- dna --- proteine --- Academic collection --- 577.112 --- 577.212.3 --- 577.212.3 Nucleic acid base and sequence compositon. Experimental deciphering of genetic code. --- Nucleic acid base and sequence compositon. Experimental deciphering of genetic code. --- Classification --- Phylogeography --- Proteids --- Biomolecules --- Polypeptides --- Proteomics --- Deoxyribonucleic acid --- Desoxyribonucleic acid --- Thymonucleic acid --- TNA (Nucleic acid) --- Deoxyribose --- Nucleic acids --- Genes --- Cladism --- Cladistic method --- Cladistic taxonomy --- Cladistics --- Cladograms --- Phylogenetic systematics --- Phylogenetic taxonomy --- Taxonomy, Cladistic --- Taxonomy, Phylogenetic --- Biology --- Amino acid sequence analysis --- Analysis, Amino acid sequence --- Peptide sequence --- Peptide sequencing --- Protein sequence --- Protein sequencing --- Sequence, Amino acid --- Amino acids --- Sequence alignment (Bioinformatics) --- Genetic Models --- Genetic Model --- Model, Genetic --- 577.112 Proteins --- Data processing --- Analysis --- Nucleic acid base and sequence compositon. Experimental deciphering of genetic code --- Phylogenomics --- Phylogenomic --- Dna --- Phylogeny. --- Data processing. --- Methods. --- methods. --- Community Phylogenetics --- Molecular Phylogenetics --- Phylogenetic Analyses --- Phylogenetic Analysis --- Phylogenetic Clustering --- Phylogenetic Comparative Analysis --- Phylogenetic Comparative Methods --- Phylogenetic Distance --- Phylogenetic Generalized Least Squares --- Phylogenetic Groups --- Phylogenetic Incongruence --- Phylogenetic Inference --- Phylogenetic Networks --- Phylogenetic Reconstruction --- Phylogenetic Relatedness --- Phylogenetic Relationships --- Phylogenetic Signal --- Phylogenetic Structure --- Phylogenetic Tree --- Phylogenetic Trees --- Analyse, Phylogenetic --- Analysis, Phylogenetic --- Analysis, Phylogenetic Comparative --- Clustering, Phylogenetic --- Community Phylogenetic --- Comparative Analysis, Phylogenetic --- Comparative Method, Phylogenetic --- Distance, Phylogenetic --- Group, Phylogenetic --- Incongruence, Phylogenetic --- Inference, Phylogenetic --- Method, Phylogenetic Comparative --- Molecular Phylogenetic --- Network, Phylogenetic --- Phylogenetic Analyse --- Phylogenetic Clusterings --- Phylogenetic Comparative Analyses --- Phylogenetic Comparative Method --- Phylogenetic Distances --- Phylogenetic Group --- Phylogenetic Incongruences --- Phylogenetic Inferences --- Phylogenetic Network --- Phylogenetic Reconstructions --- Phylogenetic Relatednesses --- Phylogenetic Relationship --- Phylogenetic Signals --- Phylogenetic Structures --- Phylogenetic, Community --- Phylogenetic, Molecular --- Reconstruction, Phylogenetic --- Relatedness, Phylogenetic --- Relationship, Phylogenetic --- Signal, Phylogenetic --- Structure, Phylogenetic --- Tree, Phylogenetic --- Molecular evolution --- Nucleotides --- Nucleotide sequence --- Molecular aspects --- DNA - Analysis - Handbooks, manuals, etc --- Proteins - Analysis - Handbooks, manuals, etc --- Cladistic analysis - Handbooks, manuals, etc --- Amino acid sequence - Data processing --- Filogènia --- Evolució molecular --- Seqüència de nucleòtids --- Informàtica. --- Aspectes moleculars

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