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Protein bioinformatics : an algorithmic approach to sequence and structure analysis
Authors: --- ---
ISBN: 9780470848395 0470848391 Year: 2004 Publisher: Chichester J. Wiley & Sons

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Abstract

Takes the novel approach to cover both the sequence and structure analysis of proteins in one volume and from an algorithmic perspective. It provides a comprehensive introduction to the analysis of protein sequence and structure analysis; takes an algorithmic approach, relying on computational methods rather than theoretical; provides an integrated presentation of theory, examples, exercises and applications; and includes coverage of both protein structure, and sequence, analysis. This book is accessible enough for biologists, yet rigorous enough for computer scientists and mathematicians.

Keywords

Proteins --- Bioinformatics --- Protein Conformation --- Sequence Analysis, Protein --- Algorithms --- Computational Biology --- Conformation, Protein --- Conformations, Protein --- Protein Conformations --- Protein Folding --- Bio-informatics --- Biological informatics --- Biology --- Information science --- Computational biology --- Systems biology --- Amino Acid Sequence Analyses --- Amino Acid Sequence Determination --- Amino Acid Sequence Determinations --- Amino Acid Sequencing --- Peptide Sequence Determination --- Protein Sequencing --- Sequence Analyses, Amino Acid --- Sequence Analysis, Amino Acid --- Sequence Analysis, Peptide --- Sequence Determination, Amino Acid --- Sequence Determinations, Amino Acid --- Amino Acid Sequence Analysis --- Peptide Sequence Analysis --- Protein Sequence Analysis --- Sequence Determination, Protein --- Acid Sequencing, Amino --- Analyses, Peptide Sequence --- Analyses, Protein Sequence --- Analysis, Peptide Sequence --- Analysis, Protein Sequence --- Peptide Sequence Analyses --- Peptide Sequence Determinations --- Protein Sequence Analyses --- Protein Sequence Determination --- Protein Sequence Determinations --- Sequence Analyses, Peptide --- Sequence Analyses, Protein --- Sequence Determination, Peptide --- Sequence Determinations, Peptide --- Sequence Determinations, Protein --- Sequencing, Amino Acid --- Sequencing, Protein --- Molecular Sequence Annotation --- Algorithm --- Structure --- methods --- Data processing --- bioinformatics --- databanken --- databases --- aminozuursequenties --- amino acid sequences --- nucleotidenvolgordes --- nucleotide sequences --- chemische structuur --- chemical structure --- studieboeken --- textbooks --- eiwitten --- proteins --- Proteomics


Book
Next-generation DNA sequencing informatics
Author:
ISBN: 9781621821236 1621821234 Year: 2015 Publisher: Cold Spring Harbor, N.Y. Cold Spring Harbor Laboratory Press

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"Next-generation DNA sequencing (NGS) technology has revolutionized biomedical research, making genome and RNA sequencing an affordable and frequently used tool for a wide variety of research applications including variant (mutation) discovery, gene expression, transcription factor analysis, metagenomics, and epigenetics. Bioinformatics methods to support DNA sequencing have become and remain a critical bottleneck for many researchers and organizations wishing to make use of NGS technology. Next-Generation DNA Sequencing Bioinformatics, Second Edition, provides thorough, plain language introduction to the necessary informatics methods and tools for analyzing NGS data as did the first edition, and provides detailed descriptions of algorithms, strengths and weaknesses of specific tools, pitfalls and alternative methods. Four new chapters in this edition cover: experimental design, sample preparation, and quality assessment of NGS data; Public databases for DNA Sequencing data; De novo transcript assembly; proteogenomics; and emerging sequencing technologies. The remaining chapters from the first edition have been updated with the latest information. This book also provides extensive reference to best-practice bioinformatics methods for NGS applications and tutorials for common workflows. The second edition of Next-Generation DNA Sequencing Bioinformatics addresses the informatics needs of students, laboratory scientists, and computing specialists who wish to take advantage of the explosion of research opportunities offered by new DNA sequencing technologies"-- "Next-generation DNA sequencing (NGS) technology has revolutionized biomedical research, making complete genome sequencing an affordable and frequently used tool for a wide variety of research applications. This book provides a thorough introduction to the necessary informatics methods and tools for operating NGS instruments and analyzing NGS data"--


Periodical
DNA research : an international journal for rapid publication of reports on genes and genomes.
Authors: ---
ISSN: 13402838 17561663 Year: 1994 Publisher: Tokyo, Japan : Oxford ; Cary, NC : Kazusa DNA Research Institute : Universal Academy Press Oxford University Press

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Book
Bioinformatics for DNA Sequence Analysis
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ISBN: 9781588299109 9781597452519 1588299104 1597452513 Year: 2009 Publisher: Totowa, NJ Humana Press :Imprint: Humana

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The storage, processing, description, transmission, connection, and analysis of the waves of new genomic data have made bioinformatics skills essential for scientists working with DNA sequences. In Bioinformatics for DNA Sequence Analysis, experts in the field provide practical guidance and troubleshooting advice for the computational analysis of DNA sequences, covering a range of issues and methods that unveil the multitude of applications and the vital relevance that the use of bioinformatics has today. Individual book chapters explore the use of specific bioinformatic tools, accompanied by practical examples, a discussion on the interpretation of results, and specific comments on strengths and limitations of the methods and tools. As a part of the highly successful Methods in Molecular Biology™ series, this work provides the kind of detailed description and implementation advice that is crucial for getting optimal results. Focused and cutting-edge, Bioinformatics for DNA Sequence Analysis serves molecular biologists, geneticists, and biochemists as an enriched task-oriented manual, offering step-by-step guidance for the analysis of DNA sequences in a simple but meaningful fashion.

Keywords

Sequence Analysis, DNA --- Computational Biology --- Bioinformatics --- Nucleotide sequence --- Bio-informatique --- Génome humain --- methods --- Laboratory manuals --- Manuels de laboratoire --- Séquençage --- Methods --- Biology --- Sequence Analysis --- Investigative Techniques --- Genetic Techniques --- Analytical, Diagnostic and Therapeutic Techniques and Equipment --- Biological Science Disciplines --- Natural Science Disciplines --- Disciplines and Occupations --- Biology - General --- Health & Biological Sciences --- Génome humain --- Séquençage --- Analysis, Sequence --- Determination, Sequence --- Determinations, Sequence --- Sequence Determinations --- Sequence Determination --- Analyses, Sequence --- Sequence Analyses --- Bio-Informatics --- Biology, Computational --- Computational Molecular Biology --- Molecular Biology, Computational --- Bio Informatics --- Bio-Informatic --- Bioinformatic --- Biologies, Computational Molecular --- Biology, Computational Molecular --- Computational Molecular Biologies --- Molecular Biologies, Computational --- Natural Sciences --- Physical Sciences --- Discipline, Natural Science --- Disciplines, Natural Science --- Natural Science --- Natural Science Discipline --- Physical Science --- Science, Natural --- Science, Physical --- Sciences, Natural --- Sciences, Physical --- Biologic Sciences --- Biological Science --- Science, Biological --- Sciences, Biological --- Biological Sciences --- Life Sciences --- Biologic Science --- Biological Science Discipline --- Discipline, Biological Science --- Disciplines, Biological Science --- Life Science --- Science Discipline, Biological --- Science Disciplines, Biological --- Science, Biologic --- Science, Life --- Sciences, Biologic --- Sciences, Life --- Genetic Technic --- Genetic Technics --- Genetic Technique --- Technic, Genetic --- Technics, Genetic --- Technique, Genetic --- Techniques, Genetic --- Genetics --- Investigative Technics --- Investigative Technic --- Investigative Technique --- Technic, Investigative --- Technics, Investigative --- Technique, Investigative --- Techniques, Investigative --- Methodological Studies --- Methodological Study --- Procedures --- Studies, Methodological --- Study, Methodological --- Method --- Procedure --- Analysis, DNA Sequence --- DNA Sequence Determination --- DNA Sequence Determinations --- DNA Sequencing --- Determination, DNA Sequence --- Determinations, DNA Sequence --- Sequence Determinations, DNA --- DNA Sequence Analysis --- Sequence Determination, DNA --- Analyses, DNA Sequence --- DNA Sequence Analyses --- Sequence Analyses, DNA --- Sequencing, DNA --- Analysis, Nucleic acid sequence --- Analysis, Nucleotide sequence --- Base sequence (Nucleic acids) --- DNA sequence --- Nucleic acid sequence analysis --- Nucleotide sequence analysis --- RNA sequence --- Sequence, Nucleotide --- Bio-informatics --- Biological informatics --- methods. --- Information science --- Computational biology --- Systems biology --- Nucleic acids --- Nucleotides --- Sequence alignment (Bioinformatics) --- Data processing --- Analysis --- Bioinformatics. --- Human genetics. --- Human Genetics. --- Heredity, Human --- Human biology --- Physical anthropology


Book
Bioanalytical chemistry
Authors: --- ---
ISBN: 9781783266722 9781783266715 1783266716 1783266724 Year: 2015 Publisher: London: Imperial college press,

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Interdisciplinary knowledge is becoming increasingly important to the modern scientist. This invaluable textbook covers bioanalytical chemistry (mainly the analysis of proteins and DNA) and explains everything for the non-biologist. Electrophoresis, mass spectrometry, biosensors, bioassays, DNA and protein sequencing are not necessarily all included in conventional analytical chemistry textbooks. The book describes the basic principles and the applications of instrumental and molecular methods. It is particularly useful to chemistry and engineering students who already have some basic knowledge about analytical chemistry. This revised second edition contains a new chapter on optical spectroscopy, and updated methods and new references throughout.


Periodical
Microbial & comparative genomics.
ISSN: 21686637 Year: 1996 Publisher: New Rochelle, NY : Mary Ann Liebert, Inc.

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Keywords

Molecular genetics --- Gene mapping --- Nucleotide sequence --- Base Sequence. --- Chromosome Mapping. --- Genome. --- Sequence Analysis, DNA. --- Gene mapping. --- Molecular genetics. --- Nucleotide sequence. --- Chromosome mapping --- Genetic mapping --- Genome mapping --- Linkage mapping (Genetics) --- Mapping, Gene --- Analysis, DNA Sequence --- DNA Sequence Determination --- DNA Sequence Determinations --- DNA Sequencing --- Determination, DNA Sequence --- Determinations, DNA Sequence --- Sequence Determinations, DNA --- DNA Sequence Analysis --- Sequence Determination, DNA --- Analyses, DNA Sequence --- DNA Sequence Analyses --- Sequence Analyses, DNA --- Sequencing, DNA --- Genomes --- Genome Mapping --- Gene Mapping --- Linkage Mapping --- Chromosome Mappings --- Gene Mappings --- Genome Mappings --- Linkage Mappings --- Mapping, Chromosome --- Mapping, Genome --- Mapping, Linkage --- Mappings, Chromosome --- Mappings, Gene --- Mappings, Genome --- Mappings, Linkage --- DNA Sequences --- DNA Sequence --- Nucleotide Sequence --- RNA Sequence --- Base Sequences --- Nucleotide Sequences --- RNA Sequences --- Sequence, Base --- Sequence, DNA --- Sequence, Nucleotide --- Sequence, RNA --- Sequences, Base --- Sequences, DNA --- Sequences, Nucleotide --- Sequences, RNA --- Analysis, Nucleic acid sequence --- Analysis, Nucleotide sequence --- Base sequence (Nucleic acids) --- DNA sequence --- Nucleic acid sequence analysis --- Nucleotide sequence analysis --- RNA sequence --- Genetics --- Genomics --- Molecular Sequence Annotation --- Genes --- Proteome --- Cytogenetics --- Genetic Markers --- Cytogenetic Analysis --- Gene Order --- Synteny --- Nucleotides --- Nucleic acids --- Sequence alignment (Bioinformatics) --- Molecular biology --- Technique --- Analysis --- Base Sequence --- Chromosome Mapping --- Genome --- Sequence Analysis, DNA


Periodical
BMC genomics.
ISSN: 14712164 Year: 2000 Publisher: London : BioMed Central,

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Keywords

Molecular biology --- Genomes --- Gene mapping --- Genomics --- Genetics --- Chromosome Mapping --- Base Sequence --- Sequence Analysis, DNA --- Genetic Techniques --- Génomes --- Cartes chromosomiques --- Génomique --- Génétique --- Periodicals --- Technique --- Périodiques --- Genomics. --- Base Sequence. --- Chromosome Mapping. --- Genetic Techniques. --- Sequence Analysis, DNA. --- Gene mapping. --- Genomes. --- Genetics & Genomics. --- Analysis, DNA Sequence --- DNA Sequence Determination --- DNA Sequence Determinations --- DNA Sequencing --- Determination, DNA Sequence --- Determinations, DNA Sequence --- Sequence Determinations, DNA --- DNA Sequence Analysis --- Sequence Determination, DNA --- Analyses, DNA Sequence --- DNA Sequence Analyses --- Sequence Analyses, DNA --- Sequencing, DNA --- Genetic Technic --- Genetic Technics --- Genetic Technique --- Technic, Genetic --- Technics, Genetic --- Technique, Genetic --- Techniques, Genetic --- Genome Mapping --- Gene Mapping --- Linkage Mapping --- Chromosome Mappings --- Gene Mappings --- Genome Mappings --- Linkage Mappings --- Mapping, Chromosome --- Mapping, Gene --- Mapping, Genome --- Mapping, Linkage --- Mappings, Chromosome --- Mappings, Gene --- Mappings, Genome --- Mappings, Linkage --- DNA Sequences --- DNA Sequence --- Nucleotide Sequence --- RNA Sequence --- Base Sequences --- Nucleotide Sequences --- RNA Sequences --- Sequence, Base --- Sequence, DNA --- Sequence, Nucleotide --- Sequence, RNA --- Sequences, Base --- Sequences, DNA --- Sequences, Nucleotide --- Sequences, RNA --- Chromosome mapping --- Genetic mapping --- Genome mapping --- Linkage mapping (Genetics) --- methods --- genomics --- genome-scale analysis --- functional genomics --- proteomics --- Haploidy --- Molecular Sequence Annotation --- Genetic Counseling --- Genetic Phenomena --- Cytogenetics --- Genetic Markers --- Cytogenetic Analysis --- Gene Order --- Synteny --- Genes --- Nucleotides --- Human Genome Project --- Genome --- Comparative Genomics --- Comparative Genomic --- Genomic, Comparative --- Genomics, Comparative --- Biotechnology --- moleculaire biologie --- biotechnologie

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